Java Version
Todd Riley has created a Java implementation for BioNetS. This version runs on Windows, Linux and even Mac OS X. This version uses the same code generator as the Mac OS X version. The code generator is written in Cocoa, so you need to install the GNUStep package as well as a standard C++ compiler (gcc). The installation instructions below show you all the steps that are needed to do that.
Todd is in the BIOMAPS Institute for Quantitative Biology atRutgers University. He can be reached at toddri@eden.rutgers.edu. When reporting problems and suggestions, please also include david@math.unc.edu and telston@unc.edu

Installation Instructions for Windows
Download
Unzip the 2 zip files IN THE SAME DIRECTORY
Follow the installed README's
Installation Instructions for Mac OS X
Download
Unzip the 2 zip files IN THE SAME DIRECTORY
Follow the installed README's
Installation Instructions for RedHat 9 (and possibly others)
Download
Unzip the 2 zip files IN THE SAME DIRECTORY
Follow the installed README's